Streptomyces varsoviensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces varsoviensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces varsoviensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces varsoviensis
NCBI Strain Identifiers NRRL ISP-5346
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 3.74%
CheckM Strain Heterogeneity 14.29
5S Count 3
16S Count 1
23S Count 7
tRNA Count 20
Contig Count 118
N50 Contigs 268,175 bp
Longest Contig 1,006,958 bp
Scaffold Count 118
N50 Scaffolds 268,175 bp
Longest Scaffold 1,006,958 bp
Genome Size 8,588,807 bp
Protein Count 7,268
Coding Density 86.38%
GC Percentage 72.40%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71863v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645386
Country None
Date 2014-07-02
Genbank Assembly Accession GCA_000718635.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,322
Refseq Category representative genome
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 67373
SSU Count 4
Submitter University of Illinois
Taxid 67373
Total Gap Length 0
Translation Table 11
tRNA Count (total) 69
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JOBF00000000.1