Streptomyces californicus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces californicus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces purpeochromogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces purpeochromogenes
NCBI Strain Identifiers NRRL ISP-5373
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000719195.1)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 107
N50 Contigs 213,680 bp
Longest Contig 576,698 bp
Scaffold Count 107
N50 Scaffolds 213,680 bp
Longest Scaffold 576,698 bp
Genome Size 7,996,821 bp
Protein Count 7,011
Coding Density 86.84%
GC Percentage 72.61%
Ambiguous Bases N/A
GTDB representative GCA_000719195.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71861v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645387
Country None
Date 2014-07-02
Genbank Assembly Accession GCA_000718615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 7,021
Refseq Category na
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 1464077
SSU Count 4
Submitter University of Illinois
Taxid 1464077
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JOBG00000000.1