Streptomyces californicus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces californicus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces griseus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; x__Streptomyces griseus group; x__Streptomyces griseus subgroup; s__Streptomyces griseus; sb__Streptomyces griseus subsp. rhodochrous
NCBI Strain Identifiers NRRL B-2932
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000719195.1)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 142
N50 Contigs 246,180 bp
Longest Contig 644,214 bp
Scaffold Count 142
N50 Scaffolds 246,180 bp
Longest Scaffold 644,214 bp
Genome Size 7,836,951 bp
Protein Count 6,770
Coding Density 87.15%
GC Percentage 72.68%
Ambiguous Bases N/A
GTDB representative GCA_000719195.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71823v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645257
Country None
Date 2014-07-02
Genbank Assembly Accession GCA_000718235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,789
Refseq Category na
Seq Rel Date 2014/07/02
Spanned Gaps 0
Species Taxid 1911
SSU Count 2
Submitter University of Illinois
Taxid 285575
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JOFF00000000.1