Streptomyces rimosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus; sb__Streptomyces rimosus subsp. rimosus
NCBI Strain Identifiers NRRL ISP-5260
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (47 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.57%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 129
N50 Contigs 199,295 bp
Longest Contig 700,856 bp
Scaffold Count 129
N50 Scaffolds 199,295 bp
Longest Scaffold 700,856 bp
Genome Size 9,589,920 bp
Protein Count 8,489
Coding Density 86.76%
GC Percentage 71.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71728v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645319
Country None
Date 2014-07-01
Genbank Assembly Accession GCA_000717285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 8,440
Refseq Category representative genome
Seq Rel Date 2014/07/01
Spanned Gaps 0
Species Taxid 1927
SSU Count 1
Submitter University of Illinois
Taxid 132474
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JNYR00000000.1