Streptomyces iakyrus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces iakyrus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces iakyrus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces iakyrus
NCBI Strain Identifiers NRRL ISP-5482
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 2.5%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 181
N50 Contigs 287,302 bp
Longest Contig 634,255 bp
Scaffold Count 181
N50 Scaffolds 287,302 bp
Longest Scaffold 634,255 bp
Genome Size 9,127,873 bp
Protein Count 8,528
Coding Density 88.28%
GC Percentage 71.21%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71705v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645283
Country Brazil: Recife; Pernambuco
Date 2014-07-01
Genbank Assembly Accession GCA_000717055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 8,559
Refseq Category na
Seq Rel Date 2014/07/01
Spanned Gaps 0
Species Taxid 68219
SSU Count 3
Submitter University of Illinois
Taxid 68219
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JNXI00000000.1