Streptomyces californicus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces californicus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces brasiliensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces brasiliensis
NCBI Strain Identifiers NRRL B-1626
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000719195.1)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.47%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 67
N50 Contigs 247,510 bp
Longest Contig 883,516 bp
Scaffold Count 67
N50 Scaffolds 247,510 bp
Longest Scaffold 883,516 bp
Genome Size 7,781,346 bp
Protein Count 6,768
Coding Density 87.13%
GC Percentage 72.69%
Ambiguous Bases N/A
GTDB representative GCA_000719195.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71701v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645206
Country None
Date 2014-07-01
Genbank Assembly Accession GCA_000717015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source from human disease
Latitude Longitude None
Molecule Count N/A
CDS Count 6,796
Refseq Category na
Seq Rel Date 2014/07/01
Spanned Gaps 0
Species Taxid 1954
SSU Count 1
Submitter University of Illinois
Taxid 1954
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNXB00000000.1