Streptomyces papulosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces papulosus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces olivaceus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces olivaceus
NCBI Strain Identifiers NRRL B-1125
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000717245.1)
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.09%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 65
N50 Contigs 518,301 bp
Longest Contig 1,239,012 bp
Scaffold Count 65
N50 Scaffolds 518,301 bp
Longest Scaffold 1,239,012 bp
Genome Size 7,397,654 bp
Protein Count 6,531
Coding Density 88.00%
GC Percentage 71.13%
Ambiguous Bases N/A
GTDB representative GCA_000717245.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM71681v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02645191
Country Japan
Date 2014-07-01
Genbank Assembly Accession GCA_000716815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 6,566
Refseq Category na
Seq Rel Date 2014/07/01
Spanned Gaps 0
Species Taxid 47716
SSU Count 3
Submitter University of Illinois
Taxid 47716
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNWM00000000.1