Streptococcus agalactiae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus agalactiae
NCBI Strain Identifiers FNA07
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000186445.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 82
N50 Contigs 60,123 bp
Longest Contig 152,744 bp
Scaffold Count 66
N50 Scaffolds 79,139 bp
Longest Scaffold 152,744 bp
Genome Size 2,105,006 bp
Protein Count 2,063
Coding Density 88.41%
GC Percentage 35.44%
Ambiguous Bases N/A
GTDB representative GCA_000186445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name StrAga1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02727744
Country Thailand: Ayutthaya
Date 2014-06-27
Genbank Assembly Accession GCA_000715295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source kidney
Latitude Longitude 14.3550 N 100.5650 E
Molecule Count N/A
CDS Count 2,122
Refseq Category na
Seq Rel Date 2014/06/27
Spanned Gaps 16
Species Taxid 1311
SSU Count 1
Submitter Faculty of Veterinary Science, Chulalongkorn University
Taxid 1311
Total Gap Length 2163
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMBI00000000.1