Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa PAO1; x__Pseudomonas aeruginosa PAO1H2O
NCBI Strain Identifiers PAO1H2O
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.47%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 479
N50 Contigs 60,008 bp
Longest Contig 170,740 bp
Scaffold Count 1
N50 Scaffolds 6,264,404 bp
Longest Scaffold 6,264,404 bp
Genome Size 6,264,404 bp
Protein Count 5,559
Coding Density 86.69%
GC Percentage 66.74%
Ambiguous Bases 8,069
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM71451v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02740985
Country USA: Bluefield; West Virginia
Date 2014-6-27
Genbank Assembly Accession GCA_000714515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source water
Latitude Longitude None
Molecule Count 1
CDS Count 5,759
Refseq Category na
Seq Rel Date 2014/06/27
Spanned Gaps 478
Species Taxid 287
SSU Count 4
Submitter University of Virginia
Taxid 1147787
Total Gap Length 138961
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None