Staphylococcus capitis
Isolate HQ 16S/23S 4 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
NCBI Strain Identifiers LNZR-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002902325.1)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 4
Contig Count 90
N50 Contigs 66,677 bp
Longest Contig 319,806 bp
Scaffold Count 90
N50 Scaffolds 66,677 bp
Longest Scaffold 319,806 bp
Genome Size 2,595,865 bp
Protein Count 2,524
Coding Density 86.57%
GC Percentage 32.67%
Ambiguous Bases N/A
GTDB representative GCA_002902325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name StaCap1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02680303
Country China: Harbin
Date 2014-06-27
Genbank Assembly Accession GCA_000712995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,482
Refseq Category na
Seq Rel Date 2014/06/27
Spanned Gaps 0
Species Taxid 29388
SSU Count 1
Submitter The Fourth Affiliated Hospital of Harbin Medical University
Taxid 29388
Total Gap Length 0
Translation Table 11
tRNA Count (total) 9
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGYJ00000000.1