Methermicoccus shengliensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Halobacteriota; c__Methanosarcinia; o__Methanosarcinales_A; f__Methermicoccaceae; g__Methermicoccus; s__Methermicoccus shengliensis
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanomicrobia; o__Methanosarcinales; f__Methermicoccaceae; g__Methermicoccus; s__Methermicoccus shengliensis
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Stenosarchaea group; c__Methanomicrobia; o__Methanosarcinales; f__Methermicoccaceae; g__Methermicoccus; s__Methermicoccus shengliensis; x__Methermicoccus shengliensis DSM 18856
NCBI Strain Identifiers DSM 18856
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 17
N50 Contigs 255,166 bp
Longest Contig 334,505 bp
Scaffold Count 15
N50 Scaffolds 287,535 bp
Longest Scaffold 334,505 bp
Genome Size 1,513,583 bp
Protein Count 1,612
Coding Density 90.38%
GC Percentage 54.66%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM71190v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02746094
Country China: Shengli oilfield
Date 2014-6-25
Genbank Assembly Accession GCA_000711905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,598
Refseq Category representative genome
Seq Rel Date 2014/06/25
Spanned Gaps 2
Species Taxid 660064
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1122233
Total Gap Length 2500
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JONQ00000000.1