Chromobacterium haemolyticum
Isolate HQ 5S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Chromobacteriaceae; g__Chromobacterium; s__Chromobacterium haemolyticum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Chromobacterium; s__Chromobacterium haemolyticum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; x__Chromobacterium group; g__Chromobacterium; s__Chromobacterium haemolyticum; x__Chromobacterium haemolyticum DSM 19808
NCBI Strain Identifiers DSM 19808
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (7 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.15%
CheckM Contamination 1.71%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 0
23S Count 0
tRNA Count 20
Contig Count 67
N50 Contigs 122,567 bp
Longest Contig 459,729 bp
Scaffold Count 63
N50 Scaffolds 123,544 bp
Longest Scaffold 459,729 bp
Genome Size 5,030,199 bp
Protein Count 4,511
Coding Density 87.71%
GC Percentage 62.23%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM71188v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02745482
Country USA: Houston; Texas
Date 2014-6-25
Genbank Assembly Accession GCA_000711885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,529
Refseq Category representative genome
Seq Rel Date 2014/06/25
Spanned Gaps 4
Species Taxid 394935
SSU Count 5
Submitter DOE Joint Genome Institute
Taxid 1121283
Total Gap Length 984
Translation Table 11
tRNA Count (total) 57
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JONK00000000.1