Andreprevotia chitinilytica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Chitinibacteraceae; g__Andreprevotia; s__Andreprevotia chitinilytica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Andreprevotia; s__Andreprevotia chitinilytica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Chromobacteriaceae; g__Andreprevotia; s__Andreprevotia chitinilytica; x__Andreprevotia chitinilytica DSM 18519
NCBI Strain Identifiers DSM 18519
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 65
N50 Contigs 262,277 bp
Longest Contig 610,461 bp
Scaffold Count 61
N50 Scaffolds 262,277 bp
Longest Scaffold 610,461 bp
Genome Size 5,149,006 bp
Protein Count 4,481
Coding Density 87.87%
GC Percentage 59.89%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM71187v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02745855
Country South Korea: Halla Mountain; Jeju Island
Date 2014-6-25
Genbank Assembly Accession GCA_000711875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,446
Refseq Category representative genome
Seq Rel Date 2014/06/25
Spanned Gaps 4
Species Taxid 396808
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1120999
Total Gap Length 1220
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JONM00000000.1