Mycobacterium tuberculosis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium tuberculosis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium tuberculosis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; x__Mycobacterium tuberculosis complex; s__Mycobacterium tuberculosis; x__Mycobacterium tuberculosis MD18115
NCBI Strain Identifiers MD18115
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000195955.2)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 89
N50 Contigs 122,556 bp
Longest Contig 303,131 bp
Scaffold Count 89
N50 Scaffolds 122,556 bp
Longest Scaffold 303,131 bp
Genome Size 4,382,711 bp
Protein Count 4,101
Coding Density 90.35%
GC Percentage 65.60%
Ambiguous Bases N/A
GTDB representative GCA_000195955.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Myco_tube_MD18115_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02584596
Country Moldova: Chisinau
Date 2014-06-12
Genbank Assembly Accession GCA_000711655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,285
Refseq Category na
Seq Rel Date 2014/06/12
Spanned Gaps 0
Species Taxid 1773
SSU Count 1
Submitter Broad Institute
Taxid 1447445
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JLGI00000000.1