Streptomyces rimosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces rimosus; x__Streptomyces rimosus R6-500
NCBI Strain Identifiers R6-500
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000717285.1)
Genome Characteristics
CheckM Completeness 99.41%
CheckM Contamination 2.21%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 316
N50 Contigs 101,718 bp
Longest Contig 477,757 bp
Scaffold Count 243
N50 Scaffolds 283,794 bp
Longest Scaffold 586,114 bp
Genome Size 8,881,740 bp
Protein Count 8,035
Coding Density 86.80%
GC Percentage 71.99%
Ambiguous Bases N/A
GTDB representative GCA_000717285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name r6_51
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02721380
Country Croatia: Zagreb
Date 2014-06-13
Genbank Assembly Accession GCA_000707925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 7,936
Refseq Category na
Seq Rel Date 2014/06/13
Spanned Gaps 73
Species Taxid 1927
SSU Count 3
Submitter TU Kaiserslautern
Taxid 1421017
Total Gap Length 2012
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJNO00000000.1