Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae BIDMC 10
NCBI Strain Identifiers BIDMC 10
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 50.0
5S Count 8
16S Count 7
23S Count 8
tRNA Count 20
Contig Count 32
N50 Contigs 529,021 bp
Longest Contig 1,341,268 bp
Scaffold Count 13
N50 Scaffolds 2,335,088 bp
Longest Scaffold 2,862,795 bp
Genome Size 5,822,710 bp
Protein Count 5,471
Coding Density 86.90%
GC Percentage 57.04%
Ambiguous Bases 2
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_BIDMC_10_V2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02138631
Country None
Date 2014-6-13
Genbank Assembly Accession GCA_000706605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source foot culture
Latitude Longitude None
Molecule Count N/A
CDS Count 5,785
Refseq Category na
Seq Rel Date 2014/06/13
Spanned Gaps 19
Species Taxid 573
SSU Count 7
Submitter Broad Institute
Taxid 1328404
Total Gap Length 32200
Translation Table 11
tRNA Count (total) 81
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNVG00000000.1