GCF-000702305 sp000702305
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__GCF-000702305; s__GCF-000702305 sp000702305
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bosea; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bosea; s__Bosea sp. 117
NCBI Strain Identifiers 117
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 18
N50 Contigs 404,316 bp
Longest Contig 992,340 bp
Scaffold Count 17
N50 Scaffolds 404,316 bp
Longest Scaffold 992,340 bp
Genome Size 4,635,764 bp
Protein Count 4,263
Coding Density 89.52%
GC Percentage 68.19%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM70230v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02841203
Country USA: Lake Washington; Washington
Date 2014-06-11
Genbank Assembly Accession GCA_000702305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sediment
Latitude Longitude 47.6312 N 122.2546 W
Molecule Count N/A
CDS Count 4,249
Refseq Category na
Seq Rel Date 2014/06/11
Spanned Gaps 1
Species Taxid 1125973
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1125973
Total Gap Length 1126
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JNLC00000000.1