Prevotella loescheii
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella loescheii
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella loescheii
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella loescheii; x__Prevotella loescheii DSM 19665 = JCM 12249 = ATCC 15930
NCBI Strain Identifiers ATCC 15930
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000378085.1)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 149
N50 Contigs 39,934 bp
Longest Contig 146,156 bp
Scaffold Count 54
N50 Scaffolds 181,917 bp
Longest Scaffold 484,404 bp
Genome Size 3,475,052 bp
Protein Count 2,787
Coding Density 82.04%
GC Percentage 46.61%
Ambiguous Bases N/A
GTDB representative GCA_000378085.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM69892v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02840639
Country None
Date 2014-6-6
Genbank Assembly Accession GCA_000698925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity- mouth
Latitude Longitude None
Molecule Count N/A
CDS Count 2,680
Refseq Category na
Seq Rel Date 2014/06/06
Spanned Gaps 95
Species Taxid 840
SSU Count 1
Submitter Washington University
Taxid 1122985
Total Gap Length 9500
Translation Table 11
tRNA Count (total) 42
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JNGW00000000.1