Clavibacter michiganensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Clavibacter; s__Clavibacter michiganensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Clavibacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Clavibacter; s__Clavibacter cf. michiganensis LMG 26808
NCBI Strain Identifiers LMG 26808
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900168345.1)
Genome Characteristics
CheckM Completeness 98.23%
CheckM Contamination 1.01%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 70
N50 Contigs 383,307 bp
Longest Contig 1,026,569 bp
Scaffold Count 70
N50 Scaffolds 383,307 bp
Longest Scaffold 1,026,569 bp
Genome Size 3,420,753 bp
Protein Count 3,208
Coding Density 89.40%
GC Percentage 72.02%
Ambiguous Bases N/A
GTDB representative GCA_900168345.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Cm26808.1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02951915
Country None
Date 2014-6-3
Genbank Assembly Accession GCA_000698005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,267
Refseq Category na
Seq Rel Date 2014/06/03
Spanned Gaps 0
Species Taxid 1291006
SSU Count 2
Submitter Gent University
Taxid 1291006
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZQZ00000000.1