Klebsiella variicola
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
NCBI Strain Identifiers MGH-76;MGH 76
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000828055.2)
Genome Characteristics
CheckM Completeness 96.08%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 60.0
5S Count 2
16S Count 2
23S Count 1
tRNA Count 16
Contig Count 400
N50 Contigs 57,253 bp
Longest Contig 269,182 bp
Scaffold Count 16
N50 Scaffolds 1,088,681 bp
Longest Scaffold 1,902,273 bp
Genome Size 5,960,376 bp
Protein Count 5,342
Coding Density 77.68%
GC Percentage 57.11%
Ambiguous Bases 2
GTDB representative GCA_000828055.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_MGH_76_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581249
Country USA: Boston
Date 2014-5-19
Genbank Assembly Accession GCA_000694735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Bile (fluid)
Latitude Longitude None
Molecule Count N/A
CDS Count 5,568
Refseq Category na
Seq Rel Date 2014/05/19
Spanned Gaps 384
Species Taxid 244366
SSU Count 2
Submitter Broad Institute
Taxid 244366
Total Gap Length 595613
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMZK00000000.1