Klebsiella variicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella variicola
NCBI Strain Identifiers MGH 68;MGH-68
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000828055.2)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 25
N50 Contigs 398,006 bp
Longest Contig 1,476,133 bp
Scaffold Count 5
N50 Scaffolds 3,513,863 bp
Longest Scaffold 3,513,863 bp
Genome Size 5,521,224 bp
Protein Count 5,126
Coding Density 87.78%
GC Percentage 57.24%
Ambiguous Bases 1
GTDB representative GCA_000828055.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_MGH_68_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581241
Country USA: Boston
Date 2014-5-19
Genbank Assembly Accession GCA_000694595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,365
Refseq Category na
Seq Rel Date 2014/05/19
Spanned Gaps 20
Species Taxid 244366
SSU Count 5
Submitter Broad Institute
Taxid 244366
Total Gap Length 21444
Translation Table 11
tRNA Count (total) 82
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMZD00000000.1