Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae CHS 71
NCBI Strain Identifiers CHS 71
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 7
23S Count 10
tRNA Count 20
Contig Count 23
N50 Contigs 1,230,715 bp
Longest Contig 1,354,382 bp
Scaffold Count 9
N50 Scaffolds 3,546,864 bp
Longest Scaffold 3,546,864 bp
Genome Size 5,884,050 bp
Protein Count 5,539
Coding Density 87.16%
GC Percentage 56.97%
Ambiguous Bases 1
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS_71_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581373
Country USA: North Carolina
Date 2014-05-19
Genbank Assembly Accession GCA_000694295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,857
Refseq Category na
Seq Rel Date 2014/05/19
Spanned Gaps 14
Species Taxid 573
SSU Count 4
Submitter Broad Institute
Taxid 1438775
Total Gap Length 39951
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMYO00000000.1