Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae CHS 57
NCBI Strain Identifiers CHS 57
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 7
23S Count 9
tRNA Count 20
Contig Count 29
N50 Contigs 784,113 bp
Longest Contig 1,437,476 bp
Scaffold Count 18
N50 Scaffolds 1,553,640 bp
Longest Scaffold 1,935,500 bp
Genome Size 5,909,541 bp
Protein Count 5,580
Coding Density 87.32%
GC Percentage 56.93%
Ambiguous Bases 2
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS_57_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581359
Country USA: North Carolina
Date 2014-05-19
Genbank Assembly Accession GCA_000694075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,892
Refseq Category na
Seq Rel Date 2014/05/19
Spanned Gaps 11
Species Taxid 573
SSU Count 6
Submitter Broad Institute
Taxid 1438763
Total Gap Length 24257
Translation Table 11
tRNA Count (total) 85
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMYD00000000.1