Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae CHS 56
NCBI Strain Identifiers CHS 56
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 7
23S Count 8
tRNA Count 20
Contig Count 30
N50 Contigs 782,711 bp
Longest Contig 1,355,663 bp
Scaffold Count 12
N50 Scaffolds 5,080,818 bp
Longest Scaffold 5,080,818 bp
Genome Size 5,783,640 bp
Protein Count 5,482
Coding Density 87.11%
GC Percentage 57.07%
Ambiguous Bases 1
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS_56_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581358
Country USA: North Carolina
Date 2014-05-20
Genbank Assembly Accession GCA_000694055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,788
Refseq Category na
Seq Rel Date 2014/05/20
Spanned Gaps 18
Species Taxid 573
SSU Count 5
Submitter Broad Institute
Taxid 1438762
Total Gap Length 39835
Translation Table 11
tRNA Count (total) 82
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMYC00000000.1