Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae CHS 50
NCBI Strain Identifiers CHS 50
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 22
N50 Contigs 953,487 bp
Longest Contig 1,474,325 bp
Scaffold Count 6
N50 Scaffolds 4,068,030 bp
Longest Scaffold 4,068,030 bp
Genome Size 5,713,014 bp
Protein Count 5,347
Coding Density 87.25%
GC Percentage 57.10%
Ambiguous Bases 1
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS_50_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581352
Country USA: North Carolina
Date 2014-05-20
Genbank Assembly Accession GCA_000693935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Wound
Latitude Longitude None
Molecule Count N/A
CDS Count 5,648
Refseq Category na
Seq Rel Date 2014/05/20
Spanned Gaps 16
Species Taxid 573
SSU Count 8
Submitter Broad Institute
Taxid 1438756
Total Gap Length 35729
Translation Table 11
tRNA Count (total) 87
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMXW00000000.1