Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae CHS 43
NCBI Strain Identifiers CHS 43
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.53%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 7
23S Count 2
tRNA Count 18
Contig Count 40
N50 Contigs 344,765 bp
Longest Contig 995,878 bp
Scaffold Count 17
N50 Scaffolds 3,585,861 bp
Longest Scaffold 3,585,861 bp
Genome Size 5,720,796 bp
Protein Count 5,295
Coding Density 87.02%
GC Percentage 57.09%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS_43_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581345
Country USA: North Carolina
Date 2014-05-20
Genbank Assembly Accession GCA_000693815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,613
Refseq Category na
Seq Rel Date 2014/05/20
Spanned Gaps 23
Species Taxid 573
SSU Count 5
Submitter Broad Institute
Taxid 1438749
Total Gap Length 36143
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMXQ00000000.1