Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae CHS 02
NCBI Strain Identifiers CHS 02
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 6
23S Count 9
tRNA Count 20
Contig Count 55
N50 Contigs 1,437,473 bp
Longest Contig 1,548,377 bp
Scaffold Count 26
N50 Scaffolds 3,036,212 bp
Longest Scaffold 3,036,212 bp
Genome Size 6,057,410 bp
Protein Count 5,662
Coding Density 85.88%
GC Percentage 56.83%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_CHS_02_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581304
Country USA: North Carolina
Date 2014-05-20
Genbank Assembly Accession GCA_000693135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Urine
Latitude Longitude None
Molecule Count N/A
CDS Count 5,990
Refseq Category na
Seq Rel Date 2014/05/20
Spanned Gaps 29
Species Taxid 573
SSU Count 5
Submitter Broad Institute
Taxid 1438708
Total Gap Length 115839
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMWI00000000.1