Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae BIDMC 68
NCBI Strain Identifiers BIDMC 68
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.7%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 4
23S Count 8
tRNA Count 19
Contig Count 34
N50 Contigs 1,244,288 bp
Longest Contig 1,699,032 bp
Scaffold Count 17
N50 Scaffolds 1,290,222 bp
Longest Scaffold 2,649,360 bp
Genome Size 5,792,118 bp
Protein Count 5,491
Coding Density 87.28%
GC Percentage 57.10%
Ambiguous Bases 2
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_BIDMC_68_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02581289
Country USA: Boston
Date 2014-5-19
Genbank Assembly Accession GCA_000693015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source BLOOD CULTURE
Latitude Longitude None
Molecule Count N/A
CDS Count 5,789
Refseq Category na
Seq Rel Date 2014/05/19
Spanned Gaps 17
Species Taxid 573
SSU Count 6
Submitter Broad Institute
Taxid 1438701
Total Gap Length 34230
Translation Table 11
tRNA Count (total) 78
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMWC00000000.1