Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Bordetella; s__Bordetella pertussis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Bordetella; s__Bordetella bronchiseptica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Bordetella; s__Bordetella bronchiseptica; x__Bordetella bronchiseptica GA96-01
NCBI Strain Identifiers GA96-01
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001525555.2)
Genome Characteristics
CheckM Completeness 99.88%
CheckM Contamination 0.12%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 0
tRNA Count 19
Contig Count 157
N50 Contigs 79,358 bp
Longest Contig 271,693 bp
Scaffold Count 157
N50 Scaffolds 79,358 bp
Longest Scaffold 271,693 bp
Genome Size 5,286,667 bp
Protein Count 5,020
Coding Density 91.74%
GC Percentage 68.30%
Ambiguous Bases N/A
GTDB representative GCA_001525555.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name gbb19v01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02231542
Country USA: Georgia
Date 2014-5-12
Genbank Assembly Accession GCA_000690135.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,031
Refseq Category na
Seq Rel Date 2014/05/12
Spanned Gaps 0
Species Taxid 518
SSU Count 1
Submitter JCVI
Taxid 1331215
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGXD00000000.1