Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Bordetella; s__Bordetella pertussis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Bordetella; s__Bordetella bronchiseptica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Alcaligenaceae; g__Bordetella; s__Bordetella bronchiseptica; x__Bordetella bronchiseptica MBORD782
NCBI Strain Identifiers MBORD782
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001525555.2)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 90
N50 Contigs 100,061 bp
Longest Contig 269,930 bp
Scaffold Count 90
N50 Scaffolds 100,061 bp
Longest Scaffold 269,930 bp
Genome Size 5,134,438 bp
Protein Count 4,847
Coding Density 91.88%
GC Percentage 68.25%
Ambiguous Bases N/A
GTDB representative GCA_001525555.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name gbb38v01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02231429
Country Netherlands
Date 2014-5-12
Genbank Assembly Accession GCA_000689915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,847
Refseq Category na
Seq Rel Date 2014/05/12
Spanned Gaps 0
Species Taxid 518
SSU Count 0
Submitter JCVI
Taxid 1331234
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JGXT00000000.1