Glaesserella parasuis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Glaesserella; s__Glaesserella parasuis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Glaesserella; s__Glaesserella parasuis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Glaesserella; s__Glaesserella parasuis; x__Glaesserella parasuis HPS9
NCBI Strain Identifiers HPS9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002015085.1)
Genome Characteristics
CheckM Completeness 99.58%
CheckM Contamination 0.72%
CheckM Strain Heterogeneity 12.5
5S Count 3
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 209
N50 Contigs 32,851 bp
Longest Contig 101,641 bp
Scaffold Count 209
N50 Scaffolds 32,851 bp
Longest Scaffold 101,641 bp
Genome Size 2,191,398 bp
Protein Count 2,259
Coding Density 87.54%
GC Percentage 39.81%
Ambiguous Bases N/A
GTDB representative GCA_002015085.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name HparHPS9v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02769535
Country USA
Date 2014-05-12
Genbank Assembly Accession GCA_000688855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source pig lungs
Latitude Longitude None
Molecule Count N/A
CDS Count 2,252
Refseq Category na
Seq Rel Date 2014/05/12
Spanned Gaps 0
Species Taxid 738
SSU Count 3
Submitter Newport Laboratories, A Sanofi company
Taxid 1450513
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDSN00000000.1