Corynebacterium halotolerans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Corynebacterium; s__Corynebacterium halotolerans
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium halotolerans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Corynebacteriaceae; g__Corynebacterium; s__Corynebacterium halotolerans; x__Corynebacterium halotolerans YIM 70093 = DSM 44683
NCBI Strain Identifiers DSM 44683
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000341345.1)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 26
N50 Contigs 301,295 bp
Longest Contig 650,616 bp
Scaffold Count 26
N50 Scaffolds 301,295 bp
Longest Scaffold 650,616 bp
Genome Size 3,202,499 bp
Protein Count 2,916
Coding Density 88.22%
GC Percentage 68.37%
Ambiguous Bases N/A
GTDB representative GCA_000341345.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM68843v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743911
Country China
Date 2014-04-08
Genbank Assembly Accession GCA_000688435.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,880
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 0
Species Taxid 225326
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1121362
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JIAJ00000000.1