Prevotella sp000688375
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Bacteroidaceae; g__Prevotella; s__Prevotella sp000688375
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotella; s__Prevotella sp. HUN102
NCBI Strain Identifiers HUN102
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 100.0
5S Count 5
16S Count 6
23S Count 5
tRNA Count 19
Contig Count 4
N50 Contigs 2,328,889 bp
Longest Contig 2,328,889 bp
Scaffold Count 4
N50 Scaffolds 2,328,889 bp
Longest Scaffold 2,328,889 bp
Genome Size 3,318,148 bp
Protein Count 3,010
Coding Density 84.30%
GC Percentage 45.26%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM68837v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743910
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000688375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,860
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 0
Species Taxid 1392486
SSU Count 6
Submitter DOE Joint Genome Institute
Taxid 1392486
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JIAF00000000.1