Bifidobacterium globosum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium globosum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium pseudolongum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium pseudolongum; sb__Bifidobacterium pseudolongum subsp. globosum; x__Bifidobacterium pseudolongum subsp. globosum DSM 20092
NCBI Strain Identifiers DSM 20092
GTDB Type Material Designation type strain of subspecies
GTDB Representative of Species False (representative is GCA_000741295.1)
Genome Characteristics
CheckM Completeness 99.56%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 40
N50 Contigs 158,702 bp
Longest Contig 329,121 bp
Scaffold Count 40
N50 Scaffolds 158,702 bp
Longest Scaffold 329,121 bp
Genome Size 1,913,048 bp
Protein Count 1,600
Coding Density 89.48%
GC Percentage 63.40%
Ambiguous Bases N/A
GTDB representative GCA_000741295.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM68759v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743881
Country None
Date 2014-04-08
Genbank Assembly Accession GCA_000687595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,570
Refseq Category na
Seq Rel Date 2014/04/08
Spanned Gaps 0
Species Taxid 1694
SSU Count 2
Submitter DOE Joint Genome Institute
Taxid 1410605
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JHWN00000000.1