Apilactobacillus kunkeei_A
Isolate MQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Apilactobacillus; s__Apilactobacillus kunkeei_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kunkeei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kunkeei; x__Lactobacillus kunkeei EFB6
NCBI Strain Identifiers EFB6
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001949975.1)
Genome Characteristics
CheckM Completeness 97.76%
CheckM Contamination 5.31%
CheckM Strain Heterogeneity 86.96
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 55
N50 Contigs 49,366 bp
Longest Contig 154,602 bp
Scaffold Count 55
N50 Scaffolds 49,366 bp
Longest Scaffold 154,602 bp
Genome Size 1,566,851 bp
Protein Count 1,428
Coding Density 90.12%
GC Percentage 36.91%
Ambiguous Bases N/A
GTDB representative GCA_001949975.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name LKU1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02767920
Country Germany: Bavaria
Date 2014-5-9
Genbank Assembly Accession GCA_000687335.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source European foulbrood of honey bees-infected honey bee larva
Latitude Longitude None
Molecule Count N/A
CDS Count 1,434
Refseq Category na
Seq Rel Date 2014/05/09
Spanned Gaps 0
Species Taxid 148814
SSU Count 1
Submitter Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory
Taxid 1419324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 35
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZBY00000000.1