Halomonas sp000686925
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Halomonadaceae; g__Halomonas; s__Halomonas sp000686925
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Halomonadaceae; g__Halomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Oceanospirillales; f__Halomonadaceae; g__Halomonas; s__Halomonas sp. HL-48
NCBI Strain Identifiers HL-48
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.86%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 5
tRNA Count 20
Contig Count 20
N50 Contigs 299,221 bp
Longest Contig 646,527 bp
Scaffold Count 1
N50 Scaffolds 3,740,234 bp
Longest Scaffold 3,740,234 bp
Genome Size 3,740,234 bp
Protein Count 3,372
Coding Density 89.53%
GC Percentage 58.98%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM68692v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743353
Country None
Date 2014-05-08
Genbank Assembly Accession GCA_000686925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,342
Refseq Category na
Seq Rel Date 2014/05/08
Spanned Gaps 19
Species Taxid 1479235
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 1479235
Total Gap Length 22667
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMMC00000000.1