Methylobacter_A tundripaludum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylomonadaceae; g__Methylobacter_A; s__Methylobacter_A tundripaludum
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylococcaceae; g__Methylobacter; s__Methylobacter tundripaludum
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Methylococcales; f__Methylococcaceae; g__Methylobacter; s__Methylobacter tundripaludum; x__Methylobacter tundripaludum 21/22
NCBI Strain Identifiers 21/22;21;22
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000190755.3)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 2.82%
CheckM Strain Heterogeneity 9.09
5S Count 3
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 4,665,210 bp
Longest Contig 4,665,210 bp
Scaffold Count 1
N50 Scaffolds 4,665,210 bp
Longest Scaffold 4,665,210 bp
Genome Size 4,665,210 bp
Protein Count 4,183
Coding Density 87.11%
GC Percentage 49.46%
Ambiguous Bases N/A
GTDB representative GCA_000190755.3
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM68592v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02743378
Country None
Date 2014-05-08
Genbank Assembly Accession GCA_000685925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 47.631156 -122.254601
Molecule Count N/A
CDS Count 4,096
Refseq Category na
Seq Rel Date 2014/05/08
Spanned Gaps 0
Species Taxid 173365
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 1408450
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JMLA00000000.1