Campylobacter_D jejuni
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni; x__Campylobacter jejuni 30286
NCBI Strain Identifiers 30286
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 18
N50 Contigs 138,701 bp
Longest Contig 224,025 bp
Scaffold Count 18
N50 Scaffolds 138,701 bp
Longest Scaffold 224,025 bp
Genome Size 1,645,076 bp
Protein Count 1,702
Coding Density 94.10%
GC Percentage 30.44%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Assembly 1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02744568
Country Viet Nam
Date 2014-5-7
Genbank Assembly Accession GCA_000685605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool
Latitude Longitude None
Molecule Count N/A
CDS Count 1,676
Refseq Category na
Seq Rel Date 2014/05/07
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter University of Exeter
Taxid 1365655
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AUUH00000000.1