Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus 09S01694
NCBI Strain Identifiers 09S01694
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 6
tRNA Count 19
Contig Count 40
N50 Contigs 119,273 bp
Longest Contig 442,253 bp
Scaffold Count 40
N50 Scaffolds 119,273 bp
Longest Scaffold 442,253 bp
Genome Size 2,739,692 bp
Protein Count 2,521
Coding Density 83.67%
GC Percentage 32.91%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stap_aure_09S01694_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02391183
Country Germany
Date 2014-04-17
Genbank Assembly Accession GCA_000684855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tissues
Latitude Longitude None
Molecule Count N/A
CDS Count 2,774
Refseq Category na
Seq Rel Date 2014/04/17
Spanned Gaps 0
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1413356
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJEK00000000.1