Mycobacterium tuberculosis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium tuberculosis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium tuberculosis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacterium; x__Mycobacterium tuberculosis complex; s__Mycobacterium tuberculosis; x__Mycobacterium tuberculosis KT-0024
NCBI Strain Identifiers KT-0024
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000195955.2)
Genome Characteristics
CheckM Completeness 99.11%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 86
N50 Contigs 94,782 bp
Longest Contig 394,571 bp
Scaffold Count 10
N50 Scaffolds 931,860 bp
Longest Scaffold 1,032,195 bp
Genome Size 4,523,586 bp
Protein Count 4,205
Coding Density 86.62%
GC Percentage 65.53%
Ambiguous Bases N/A
GTDB representative GCA_000195955.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Myco_tube_KT-0024_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02360564
Country South Korea
Date 2014-5-3
Genbank Assembly Accession GCA_000673775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,270
Refseq Category na
Seq Rel Date 2014/05/03
Spanned Gaps 76
Species Taxid 1773
SSU Count 1
Submitter Broad Institute
Taxid 1400886
Total Gap Length 174182
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JLSA00000000.1