Streptococcus pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus pyogenes; x__Streptococcus pyogenes SP6-LAU
NCBI Strain Identifiers SP6-LAU
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002055535.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 19
N50 Contigs 116,374 bp
Longest Contig 674,975 bp
Scaffold Count 19
N50 Scaffolds 116,374 bp
Longest Scaffold 674,975 bp
Genome Size 1,733,546 bp
Protein Count 1,650
Coding Density 86.77%
GC Percentage 38.41%
Ambiguous Bases 4
GTDB representative GCA_002055535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Draft SP6-LAU Genome
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02741840
Country Lebanon: Byblos
Date 2014-04-28
Genbank Assembly Accession GCA_000648855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source throat
Latitude Longitude None
Molecule Count N/A
CDS Count 1,693
Refseq Category na
Seq Rel Date 2014/04/28
Spanned Gaps 0
Species Taxid 1314
SSU Count 0
Submitter Lebanese American University
Taxid 1390081
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AWPD00000000.1