Bradyrhizobium diazoefficiens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Xanthobacteraceae; g__Bradyrhizobium; s__Bradyrhizobium diazoefficiens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bradyrhizobium; s__Bradyrhizobium diazoefficiens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bradyrhizobium; s__Bradyrhizobium diazoefficiens; x__Bradyrhizobium diazoefficiens SEMIA 5080
NCBI Strain Identifiers SEMIA 5080
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000011365.1)
Genome Characteristics
CheckM Completeness 99.99%
CheckM Contamination 0.3%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 13
N50 Contigs 1,854,659 bp
Longest Contig 4,075,193 bp
Scaffold Count 13
N50 Scaffolds 1,854,659 bp
Longest Scaffold 4,075,193 bp
Genome Size 9,085,533 bp
Protein Count 8,479
Coding Density 84.88%
GC Percentage 63.98%
Ambiguous Bases 40
GTDB representative GCA_000011365.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM64859v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02739028
Country Brazil
Date 2014-10-6
Genbank Assembly Accession GCA_000648595.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soybean
Latitude Longitude None
Molecule Count N/A
CDS Count 8,671
Refseq Category na
Seq Rel Date 2014/10/06
Spanned Gaps 0
Species Taxid 1355477
SSU Count 1
Submitter LNCC-Embrapa Soja
Taxid 754504
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ADOU00000000.2