Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus
NCBI Strain Identifiers 1MPS;SA0518
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.42%
CheckM Strain Heterogeneity 55.56
5S Count 0
16S Count 3
23S Count 1
tRNA Count 20
Contig Count 301
N50 Contigs 21,887 bp
Longest Contig 163,024 bp
Scaffold Count 301
N50 Scaffolds 21,887 bp
Longest Scaffold 163,024 bp
Genome Size 2,948,960 bp
Protein Count 2,976
Coding Density 83.88%
GC Percentage 32.74%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SAU05181.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02644450
Country Russia: Moscow
Date 2014-4-23
Genbank Assembly Accession GCA_000647695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude 55.818539 N 37.461347 E
Molecule Count N/A
CDS Count 3,220
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 0
Species Taxid 1280
SSU Count 3
Submitter Research Institute of childrens infections
Taxid 46170
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFAY00000000.1