Staphylococcus aureus
Isolate HQ 16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus VET1859R
NCBI Strain Identifiers VET1859R
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 6
tRNA Count 17
Contig Count 59
N50 Contigs 134,954 bp
Longest Contig 538,684 bp
Scaffold Count 56
N50 Scaffolds 137,433 bp
Longest Scaffold 538,684 bp
Genome Size 2,827,079 bp
Protein Count 2,622
Coding Density 83.67%
GC Percentage 32.87%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_VET1859R_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02404297
Country Netherlands
Date 2014-4-23
Genbank Assembly Accession GCA_000646555.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,868
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 3
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1422714
Total Gap Length 300
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JIHF00000000.1