Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus VET0304R
NCBI Strain Identifiers VET0304R
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.86%
CheckM Strain Heterogeneity 75.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 55
N50 Contigs 148,108 bp
Longest Contig 280,091 bp
Scaffold Count 54
N50 Scaffolds 148,108 bp
Longest Scaffold 280,091 bp
Genome Size 2,839,472 bp
Protein Count 2,655
Coding Density 83.72%
GC Percentage 32.86%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_VET0304R_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02404154
Country Netherlands
Date 2014-4-23
Genbank Assembly Accession GCA_000643355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,897
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 1
Species Taxid 1280
SSU Count 3
Submitter Broad Institute
Taxid 1422571
Total Gap Length 149
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JIOR00000000.1