Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus VET0180R
NCBI Strain Identifiers VET0180R
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 4
tRNA Count 19
Contig Count 34
N50 Contigs 414,259 bp
Longest Contig 643,554 bp
Scaffold Count 33
N50 Scaffolds 463,551 bp
Longest Scaffold 643,554 bp
Genome Size 2,797,947 bp
Protein Count 2,607
Coding Density 83.86%
GC Percentage 32.84%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_VET0180R_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02404066
Country Netherlands
Date 2014-4-23
Genbank Assembly Accession GCA_000642075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,846
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 1
Species Taxid 1280
SSU Count 3
Submitter Broad Institute
Taxid 1422483
Total Gap Length 100
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JIRR00000000.1