Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M357
NCBI Strain Identifiers M357
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.92%
CheckM Strain Heterogeneity 33.33
5S Count 0
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 32
N50 Contigs 186,002 bp
Longest Contig 442,448 bp
Scaffold Count 29
N50 Scaffolds 201,629 bp
Longest Scaffold 577,227 bp
Genome Size 2,728,245 bp
Protein Count 2,513
Coding Density 83.93%
GC Percentage 32.85%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M357_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02391270
Country Netherlands
Date 2014-4-23
Genbank Assembly Accession GCA_000639395.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tissues
Latitude Longitude None
Molecule Count N/A
CDS Count 2,768
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 3
Species Taxid 1280
SSU Count 3
Submitter Broad Institute
Taxid 1413443
Total Gap Length 510
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JIXV00000000.1