Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus C1673
NCBI Strain Identifiers C1673
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 4
tRNA Count 20
Contig Count 42
N50 Contigs 173,467 bp
Longest Contig 357,284 bp
Scaffold Count 41
N50 Scaffolds 173,467 bp
Longest Scaffold 357,284 bp
Genome Size 2,827,424 bp
Protein Count 2,631
Coding Density 83.79%
GC Percentage 32.88%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_C1673_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02391297
Country Spain
Date 2014-4-23
Genbank Assembly Accession GCA_000638535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Bodily fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 2,877
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 1
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1413470
Total Gap Length 125
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JIZP00000000.1