Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus 2011-60-1490-31
NCBI Strain Identifiers 2011-60-1490-31
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 98.38%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 5
23S Count 6
tRNA Count 19
Contig Count 72
N50 Contigs 152,443 bp
Longest Contig 441,774 bp
Scaffold Count 69
N50 Scaffolds 185,469 bp
Longest Scaffold 441,774 bp
Genome Size 2,861,204 bp
Protein Count 2,668
Coding Density 82.35%
GC Percentage 32.85%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_2011-60-1490-31_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02391351
Country Germany
Date 2014-4-23
Genbank Assembly Accession GCA_000637415.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Bodily fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 2,903
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 3
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1413524
Total Gap Length 799
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJCC00000000.1