Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus 11S00627
NCBI Strain Identifiers 11S00627
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 6
tRNA Count 20
Contig Count 34
N50 Contigs 206,347 bp
Longest Contig 425,420 bp
Scaffold Count 31
N50 Scaffolds 279,148 bp
Longest Scaffold 649,103 bp
Genome Size 2,800,209 bp
Protein Count 2,594
Coding Density 83.72%
GC Percentage 32.90%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_11S00627_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02391187
Country Germany
Date 2014-4-23
Genbank Assembly Accession GCA_000636815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Tissues
Latitude Longitude None
Molecule Count N/A
CDS Count 2,852
Refseq Category na
Seq Rel Date 2014/04/23
Spanned Gaps 3
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1413360
Total Gap Length 865
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JJDJ00000000.1